MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Escherichia coli
19428wD4_HM13
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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NCBI Annotation
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Genome Info
Taxon Description
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NCBI Genome Annotation:
contigs: 110
bases: 5,033,648 bps
CDS: 4,754
rRNA: 21
tRNA: 78
tmRNA: 1
Total number of protein coding genes annotated/found:
4,625
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Items 1 - 20
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range
Gene Product Name
SEQF5033|JADGMH010000001.1
MBF0788849.1
Genome Viewer
NA
AA
1116/372
516851-517966
tetratricopeptide repeat protein
SEQF5033|JADGMH010000001.1
MBF0788848.1
Genome Viewer
NA
AA
870/290
515742-516611
succinate--CoA ligase subunit alpha
SEQF5033|JADGMH010000001.1
MBF0788847.1
Genome Viewer
NA
AA
1167/389
514576-515742
ADP-forming succinate--CoA ligase subunit beta
SEQF5033|JADGMH010000001.1
MBF0788846.1
Genome Viewer
NA
AA
1218/406
513097-514314
2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase
SEQF5033|JADGMH010000001.1
MBF0788845.1
Genome Viewer
NA
AA
2802/934
510281-513082
2-oxoglutarate dehydrogenase E1 component
SEQF5033|JADGMH010000001.1
MBF0788844.1
Genome Viewer
NA
AA
717/239
509108-509824
succinate dehydrogenase iron-sulfur subunit SdhB
SEQF5033|JADGMH010000001.1
MBF0788843.1
Genome Viewer
NA
AA
1767/589
507326-509092
succinate dehydrogenase flavoprotein subunit
SEQF5033|JADGMH010000001.1
MBF0788842.1
Genome Viewer
NA
AA
348/116
506979-507326
succinate dehydrogenase membrane anchor subunit
SEQF5033|JADGMH010000001.1
MBF0788841.1
Genome Viewer
NA
AA
405/135
506581-506985
succinate dehydrogenase cytochrome b556 subunit
SEQF5033|JADGMH010000001.1
MBF0788840.1
Genome Viewer
NA
AA
108/36
506200-506093
hypothetical protein
SEQF5033|JADGMH010000001.1
MBF0788839.1
Genome Viewer
NA
AA
1284/428
505887-504604
citrate (Si)-synthase
SEQF5033|JADGMH010000001.1
MBF0788838.1
Genome Viewer
NA
AA
375/125
504458-504084
fimbrial protein
SEQF5033|JADGMH010000001.1
MBF0788837.1
Genome Viewer
NA
AA
1047/349
503932-502886
AbrB family transcriptional regulator
SEQF5033|JADGMH010000001.1
MBF0788836.1
Genome Viewer
NA
AA
792/264
502098-502889
endonuclease VIII
SEQF5033|JADGMH010000001.1
MBF0788835.1
Genome Viewer
NA
AA
735/245
501328-502062
5-oxoprolinase subunit PxpA
SEQF5033|JADGMH010000001.1
MBF0788834.1
Genome Viewer
NA
AA
933/311
500406-501338
5-oxoprolinase subunit PxpC
SEQF5033|JADGMH010000001.1
MBF0788833.1
Genome Viewer
NA
AA
657/219
499756-500412
5-oxoprolinase subunit PxpB
SEQF5033|JADGMH010000001.1
MBF0788832.1
Genome Viewer
NA
AA
744/248
498990-499733
radiation resistance protein YbgI
SEQF5033|JADGMH010000001.1
MBF0788831.1
Genome Viewer
NA
AA
1482/494
498719-497238
dipeptide permease DtpD
SEQF5033|JADGMH010000001.1
MBF0788830.1
Genome Viewer
NA
AA
1419/473
495778-497196
deoxyribodipyrimidine photo-lyase
Items 1 - 20
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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